BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017C10LP1|AL427141
(931 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1017 536 e-152
>3x_Contig1017
Length = 3431
Score = 536 bits (262), Expect = e-152
Identities = 303/329 (92%)
Strand = Plus / Plus
Query: 1 gatccttttgaacctgtttgttgtccctcttttacgatgggagaattgaatcatccgcca 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2155 gatccttttgaccctgtttgttgtccctcttttacgatgggagaattgaatcatccgcca 2214
Query: 61 ttaaaccgaatgtgatagtttttccagtttttcttcccctccctacatccatttctaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2215 ttaaaccgaatgtgatagtttttccagtttttcttcccctccctacatccatttctaaag 2274
Query: 121 aattcacggacattttcgcatgaatggggaaagttgactcagtngactctatttggttcc 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 2275 aattcacggacattttcgcatgaatggggaaagttgactcagttgactctatttggttcc 2334
Query: 181 tcagccaaatagcaggttaggcatactgggatcyggmcggcttgamactggycaactgtt 240
||||||||||||||||||||||||||||||||| || |||||||| ||||| ||||||||
Sbjct: 2335 tcagccaaatagcaggttaggcatactgggatctggacggcttgaaactggtcaactgtt 2394
Query: 241 tcamcgtaattggmacyctaagtgmcaaayaccaccaccgngnnncgccanncagggctc 300
||| ||||||||| || ||||||| |||| ||||| |||| | ||| | ||||| ||
Sbjct: 2395 tcaacgtaattggaactctaagtgacaaataccacaaccgagtatcgcaattcagggatc 2454
Query: 301 matggmcgamcaammcmcgattcatttgc 329
|||| ||| ||| | ||||||||||||
Sbjct: 2455 aatggacgaacaaaacacgattcatttgc 2483
Score = 135 bits (66), Expect = 2e-31
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 385 tgcataycmcacagacggacagmcagtcagagaaatcgactcayacctttcccttgatta 444
|||||| | ||||||||||||| |||| ||||||||||||||| ||||||||||||||||
Sbjct: 2538 tgcatatcacacagacggacagacagttagagaaatcgactcatacctttcccttgatta 2597
Query: 445 amgggaatmatttgycgtcagtgt 468
| |||||| ||||| |||||||||
Sbjct: 2598 aagggaataatttgtcgtcagtgt 2621
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.717 1.34
Gapped
Lambda K H
1.42 0.717 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2666
Number of Sequences: 1807
Number of extensions: 2666
Number of successful extensions: 87
Number of sequences better than 1.0e-20: 1
length of query: 931
length of database: 10,358,551
effective HSP length: 16
effective length of query: 915
effective length of database: 10,329,639
effective search space: 9451619685
effective search space used: 9451619685
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.6 bits)
S1: 11 (23.0 bits)
S2: 49 (100.7 bits)